STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII86060.1Soluble pyridine nucleotide transhydrogenase. (474 aa)    
Predicted Functional Partners:
pdhB
Pyruvate dehydrogenase E1 component beta subunit PdhB.
 
 0.997
nadE
Glutamine-dependent NAD(+) synthase NadE.
    
 0.917
pntB
NAD(P) transhydrogenase beta subunit PntB.
   
 
 0.908
ppnK
Putative inorganic polyphosphate/ATP-NAD kinase PpnK.
     
 0.907
pntA
NAD(P) transhydrogenase alpha subunit PntA.
     
 0.906
mazG
Protein MazG.
    
 0.905
nudc
NADH pyrophosphatase Nudc.
     
 0.902
nadD
Nicotinic acid mononucleotide adenyltransferase NadD.
   
 
 0.901
nuoEF
NADH-quinone oxidoreductase subunits E/F (fused).
 
 0.839
gcvP
Glycine dehydrogenase GcvP.
  
 
 0.829
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.