STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII86119.1Glutamate--cysteine ligase. (456 aa)    
Predicted Functional Partners:
gshB
Glutathione synthase GshB.
    
 0.957
AII85633.1
Putative gamma-glutamyltransferase ywrD.
     
  0.900
AII85702.1
5-oxoprolinase (ATP-hydrolyzing).
     
  0.900
ilvE
Branched-chain-amino-acid aminotransferase IlvE.
     
  0.900
AII86038.1
Putative cytosol aminopeptidase PepA.
     
  0.900
AII86493.1
Putative branched-chain-amino-acid aminotransferase IlvE.
     
  0.900
pepN
Aminopeptidase N.
    
  0.900
pepA
Cytosol aminopeptidase PepA.
     
  0.900
AII88562.1
Putative aminotransferase class IV.
     
  0.900
gltD
Glutamate synthase [NADPH] small chain GltD.
  
  
  0.822
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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