STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII86227.1Dimethylmenaquinone methyltransferase. (221 aa)    
Predicted Functional Partners:
AII86392.1
Putative N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.
 
  
 0.941
AII86391.1
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase.
  
  
 
0.928
AII86381.1
Thiamine pyrophosphate enzyme-like TPP-binding protein.
     
  0.900
AII87239.1
Putative acetolactate synthase small subunit IlvH.
     
  0.900
ilvI
Acetolactate synthase isozyme large subunit IlvI.
     
  0.900
AII87401.1
Thiamine pyrophosphate protein.
     
  0.900
AII86228.1
Hypothetical protein.
 
     0.700
AII86225.1
Putative fumarylacetoacetate hydrolase.
     
 0.665
AII86226.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
       0.661
aspC1
Aspartate aminotransferase AspC.
 
     0.643
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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