STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliSFlagellar protein FliS. (123 aa)    
Predicted Functional Partners:
fliC
Flagellin FliC.
  
 
 0.983
flgL
Flagellar hook-associated protein FlgL.
  
 
 0.975
flhA
Flagellar biosynthesis protein FlhA.
  
 
 0.972
fliI
Flagellar protein export ATPase FliI.
  
 
 0.942
fliE
Flagellar hook-basal body complex subunit FliE.
  
 
 0.941
flgK
Flagellar hook-associated protein FlgK.
  
 
 0.935
AII86332.1
Putative flagellar assembly protein FliH.
  
  
 0.933
fliF
Flagellar M-ring protein FliF.
  
  
 0.932
fliD
Flagellar hook-associated protein FliD.
  
 
 0.931
cheA
Chemotaxis histidine kinase CheA.
  
  
 0.931
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.