STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgDFlagellar basal body rod modification protein FlgD. (238 aa)    
Predicted Functional Partners:
flgB
Flagellar basal-body rod protein FlgB.
 
 
 0.998
flgC
Flagellar basal-body rod protein FlgC.
 
 
 0.997
flgE
Flagellar hook protein FlgE.
 
 
 0.993
fliE
Flagellar hook-basal body complex subunit FliE.
 
 
 0.991
flgH
Flagellar L-ring protein FlgH.
 
 
 0.991
flgG2
Flagellar basal-body rod protein FlgG.
 
 
 0.991
AII86351.1
Putative flagellar basal body rod protein FlgF.
 
 
 0.991
flgI
Flagellar P-ring protein FlgI.
 
 
 0.990
fliF
Flagellar M-ring protein FliF.
 
 
 0.989
flgL
Flagellar hook-associated protein FlgL.
 
 
 0.985
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.