STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AII86478.1Hypothetical protein DUF1052. (154 aa)    
Predicted Functional Partners:
AII87499.1
Putative DEAD/DEAH box helicase.
  
     0.712
AII87498.1
Hypothetical protein, calcineurin-like phosphoesterase-like protein.
  
     0.707
mttB3
Trimethylamine methyltransferase MttB.
       0.568
AII87729.1
Hypothetical protein.
  
   
 0.526
AII87640.1
Hypothetical protein.
  
     0.519
AII87235.1
Hypothetical protein.
  
     0.468
AII87590.1
Hypothetical protein DUF1790.
  
     0.433
glnD
Uridylyltransferase GlnD.
  
     0.428
AII86553.1
Hypothetical protein, lysophospholipase L2.
  
     0.424
AII86036.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.