STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII86572.1Hypothetical protein, calcineurin-like phosphoesterase-like protein. (265 aa)    
Predicted Functional Partners:
cheY
Response regulator CheY.
    
 0.938
AII87791.1
Hypothetical protein, calcineurin-like phosphoesterase-like protein.
  
  
 
0.928
amn
AMP nucleosidase Amn.
  
  
  0.917
surE1
5'-nucleotidase SurE.
   
 
 0.906
apt
Adenine phosphoribosyltransferase Apt.
  
 
  0.903
adk
Adenylate kinase Adk.
     
 0.903
surE2
5'-nucleotidase SurE.
     
  0.900
mazG
Protein MazG.
    
  0.900
purB
Adenylosuccinate lyase PurB.
     
  0.900
pyc
Pyruvate carboxylase Pyc.
       0.716
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.