STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tarMethyl-accepting chemotaxis protein II. (625 aa)    
Predicted Functional Partners:
cheW
Chemotaxis protein CheW.
 
 0.999
cheA
Chemotaxis histidine kinase CheA.
 
 0.999
cheR
Chemotaxis protein methyltransferase CheR.
 
 0.998
cheB
Chemotaxis response regulator protein-glutamate methylesterase CheB.
 0.996
cheY
Response regulator CheY.
 
 
 0.945
motA
Chemotaxis protein MotA.
 
  
 0.833
AII86251.1
Signal transduction histidine kinase.
 
 0.825
flhA
Flagellar biosynthesis protein FlhA.
  
 0.819
fliG
Flagellar motor switch protein G.
 
  
 0.799
fliN
Flagellar motor switch protein FliN.
 
  
 0.789
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.