STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII86764.1Hypothetical protein, monooxygenase-like protein. (100 aa)    
Predicted Functional Partners:
AII86762.1
Sugar ABC transporter, ATP-binding protein.
  
  
 0.788
AII86763.1
Sugar ABC transporter, permease protein.
  
  
 0.785
AII86761.1
Putative oxidoreductase.
       0.775
AII86760.1
Sugar ABC transporter, periplasmic binding protein.
  
  
 0.606
AII86766.1
Putative oxidoreductase.
       0.513
AII86765.1
Hypothetical protein.
       0.510
AII86759.1
Xylose isomerase.
       0.462
polA
DNA polymerase I.
   
    0.403
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.