STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII86836.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
AII88143.1
Putative transporter, periplasmic binding protein.
  
    0.628
AII86382.1
Hypothetical protein.
  
     0.486
AII88141.1
Arylsulfatase.
  
     0.463
AII86834.1
Hypothetical protein.
       0.428
AII86835.1
DedA family protein.
       0.428
AII88142.1
Transcriptional regulator, MarR family.
  
     0.423
AII88133.1
Transcriptional regulator, MarR family.
  
     0.418
AII88144.1
TRAP transporter, 4TM/12TM fusion protein.
  
     0.408
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.