STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nuoKNADH-quinone oxidoreductase subunit K. (101 aa)    
Predicted Functional Partners:
nuoA
NADH-quinone oxidoreductase subunit A.
 
 0.999
nuoB
NADH-quinone oxidoreductase subunit NuoB.
 
 0.999
nuoD
NADH-quinone oxidoreductase subunit D.
 
 0.999
nuoH
NADH-quinone oxidoreductase subunit H.
 
 0.999
nuoI
NADH-quinone oxidoreductase subunit I.
 
 0.999
nuoJ
NADH-quinone oxidoreductase subunit J.
 
 0.999
nuoL
NADH-quinone oxidoreductase subunit L.
 
 0.999
nuoM
NADH-quinone oxidoreductase subunit M.
 
 0.999
nuoN
NADH-quinone oxidoreductase subunit N.
 
 0.999
nuoC
NADH-quinone oxidoreductase subunit C.
 
 0.998
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.