STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zapACell division protein ZapA. (134 aa)    
Predicted Functional Partners:
AII87011.1
Hypothetical protein.
  
  
 0.862
AII86600.1
Putative cell division protein FtsQ.
  
   
 0.825
AII86131.1
Hypothetical protein.
  
     0.772
AII88295.1
Hypothetical protein; Associated with PHB synthesis.
  
     0.769
AII86114.1
Hypothetical protein.
  
     0.765
AII87218.1
Hypothetical protein.
  
   
 0.762
AII85799.1
Hypothetical protein.
 
   
 0.761
AII87045.1
Hypothetical protein.
  
    0.750
AII88040.1
Hypothetical protein.
  
     0.747
AII85782.1
Hypothetical protein.
  
     0.735
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.