STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII87146.1Putative branched-chain amino acid transport ATP-binding protein. (259 aa)    
Predicted Functional Partners:
AII87148.1
Putative branched-chain amino acid transport system permease protein.
 
 0.996
AII87149.1
Putative branched-chain amino acid transport system permease protein.
 
 0.996
AII87145.1
Putative amino-acid binding protein.
 
 
 0.993
AII87147.1
Putative branched-chain amino acid transport ATP-binding protein.
 
 
0.988
AII86748.1
Branched-chain amino acid ABC transporter, permease protein.
 
 0.967
AII86669.1
Branched-chain amino acid ABC transporter, permease protein.
 
 0.958
AII88361.1
High-affinity branched-chain amino acid transporter permease protein.
 
 0.942
AII86387.1
Putative transporter, permease protein.
 
 0.904
AII85955.1
Putative branched-chain amino acid transport system permease protein.
 
 0.895
AII86385.1
Branched-chain amino acid ABC transporter, ATP-binding protein.
 
0.774
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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