STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gptXanthine phosphoribosyltransferase Gpt. (167 aa)    
Predicted Functional Partners:
rihA
Pyrimidine-specific ribonucleoside hydrolase RihA.
    
 0.961
guaB
Inosine-5'-monophosphate dehydrogenase GuaB.
  
 
 0.946
apt
Adenine phosphoribosyltransferase Apt.
  
 0.926
gmk
Guanylate kinase Gmk.
   
 0.914
guaA
GMP synthase GuaA.
  
 
 0.913
rdgB
Nucleoside-triphosphatase RdgB.
  
 
  0.905
AII86956.1
Non-specific ribonucleoside hydrolase rihC.
     
 0.904
AII86952.1
Purine nucleoside phosphorylase deoD-type.
    
  0.902
surE1
5'-nucleotidase SurE.
     
 0.901
AII86173.1
Glutamine amidotransferase class-I.
    
  0.901
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.