STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII87280.1Putative soxT, transmembrane protein DUF395. (351 aa)    
Predicted Functional Partners:
soxS
Protein SoxS.
 
     0.904
soxW
Thioredoxin SoxW.
 
     0.868
soxY
Protein SoxY.
 
     0.837
soxZ
Protein SoxZ.
 
   
 0.836
soxX
Cytochrome c.
 
    0.833
soxA2
Diheme cytochrome c.
 
  
 0.830
soxD2
Sulfite oxidase cytochrome subunit SoxD.
 
  
 0.821
soxC
Sulfite oxidase molybdopterin subunit SoxC.
 
   
 0.818
soxB2
Sulfur oxidation protein SoxB.
 
     0.814
soxR
HTH-type transcriptional regulator, ArsR family.
 
     0.803
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.