STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII87442.1Benzoate-coenzyme A ligase. (511 aa)    
Predicted Functional Partners:
AII87436.1
Thioesterase-like protein.
 
 
 0.976
AII87342.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.916
AII86245.1
Putative amidase.
   
 
  0.903
AII86299.1
Amidase.
   
 
  0.903
pobA
P-hydroxybenzoate hydroxylase PobA.
  
 
 0.903
AII88504.1
Amidase.
   
 
  0.903
AII87441.1
Alpha/beta hydrolase.
 
   
 0.892
boxC
benzoyl-CoA-dihydrodiol lyase BoxC.
 
 
 0.877
AII87435.1
Putative transcriptional regulator.
 
 
 
 0.865
boxA
benzoyl-CoA oxygenase component A.
 
  
 0.855
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.