Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mgtEMagnesium transporter MgtE. (457 aa)    
Predicted Functional Partners:
AII87443.1
Putative 5-formyltetrahydrofolate cyclo-ligase family protein.
       0.818
guaD
Guanine deaminase GuaD.
       0.575
AII88510.1
Putative alpha-ketoglutarate-dependent dioxygenase AlkB.
    
 0.497
AII88232.1
Putative HTH-type transcriptional regulator, AraC family.
      0.484
guaA
GMP synthase GuaA.
  
  
 0.439
AII87442.1
Benzoate-coenzyme A ligase.
       0.430
recR
Recombination protein RecR.
     
 0.417
slt
Soluble lytic murein transglycosylase Slt.
     
 0.410
argF
Ornithine carbamoyltransferase ArgF.
     
 0.407
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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