Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AII87456.1Putative deaminase. (144 aa)    
Predicted Functional Partners:
tilS
tRNA(Ile)-lysidine synthase TilS.
  
 0.898
hisE
phosphoribosyl-ATP pyrophosphatase HisE.
   
  
 0.807
AII87457.1
Putative ribosomal large subunit pseudouridine synthase B.
       0.665
AII85745.1
Putative nitroreductase.
  
  
 0.624
truA
tRNA pseudouridine synthase A.
 
  
 0.620
AII87679.1
Putative tetrapyrrole methylase.
 
  
 0.598
guaA
GMP synthase GuaA.
  
  
 0.585
AII87157.1
Hypothetical protein, NOL1/NOP2/sun family.
 
  
 0.572
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit GatC.
     
 0.565
gatA3
glutamyl-tRNA(Gln) amidotransferase subunit A.
       0.557
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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