Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AII87467.1Putative sulfate transporter. (543 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein AcpP.
    
 
 0.726
cynT
Carbonic anhydrase CynT.
 
  
 0.627
AII88129.1
Hypothetical protein.
    
 
 0.602
mtnP
Methylthioadenosine phosphorylase MtnP.
     
 0.542
petB
Cytochrome b.
    
 
 0.540
cysC
Bifunctional sulfate adenylyltransferase / adenylyl-sulfate kinase CysC.
   
  
 0.536
AII87040.1
Acyl carrier protein.
    
 
 0.470
apt
Adenine phosphoribosyltransferase Apt.
  
    0.461
rimO
Ribosomal protein S12 methylthiotransferase RimO.
  
    0.433
nuoM
NADH-quinone oxidoreductase subunit M.
  
 
 0.429
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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