Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AII87502.1 | AII87505.1 | RCA23_c19710 | RCA23_c19740 | Hypothetical protein. | Hypothetical protein. | 0.603 |
AII87502.1 | fhs | RCA23_c19710 | RCA23_c19700 | Hypothetical protein. | Formate--tetrahydrofolate ligase Fhs. | 0.540 |
AII87502.1 | folD | RCA23_c19710 | RCA23_c19690 | Hypothetical protein. | Bidunctional enzyme FolD; Includes methylenetetrahydrofolate dehydrogenase, methylenetetrahydrofolate cyclohydrolase. | 0.455 |
AII87502.1 | ftsH | RCA23_c19710 | RCA23_c19720 | Hypothetical protein. | Cell division protease FtsH. | 0.695 |
AII87502.1 | moaC | RCA23_c19710 | RCA23_c14920 | Hypothetical protein. | Molybdenum cofactor biosynthesis protein MoaC. | 0.423 |
AII87502.1 | pal | RCA23_c19710 | RCA23_c19750 | Hypothetical protein. | Peptidoglycan-associated lipoprotein Pal. | 0.537 |
AII87502.1 | soxF2 | RCA23_c19710 | RCA23_c17330 | Hypothetical protein. | Sulfide dehydrogenase flavoprotein chain SoxF. | 0.487 |
AII87502.1 | tilS | RCA23_c19710 | RCA23_c19730 | Hypothetical protein. | tRNA(Ile)-lysidine synthase TilS. | 0.542 |
AII87505.1 | AII87502.1 | RCA23_c19740 | RCA23_c19710 | Hypothetical protein. | Hypothetical protein. | 0.603 |
AII87505.1 | ftsH | RCA23_c19740 | RCA23_c19720 | Hypothetical protein. | Cell division protease FtsH. | 0.703 |
AII87505.1 | pal | RCA23_c19740 | RCA23_c19750 | Hypothetical protein. | Peptidoglycan-associated lipoprotein Pal. | 0.879 |
AII87505.1 | tilS | RCA23_c19740 | RCA23_c19730 | Hypothetical protein. | tRNA(Ile)-lysidine synthase TilS. | 0.854 |
fhs | AII87502.1 | RCA23_c19700 | RCA23_c19710 | Formate--tetrahydrofolate ligase Fhs. | Hypothetical protein. | 0.540 |
fhs | folD | RCA23_c19700 | RCA23_c19690 | Formate--tetrahydrofolate ligase Fhs. | Bidunctional enzyme FolD; Includes methylenetetrahydrofolate dehydrogenase, methylenetetrahydrofolate cyclohydrolase. | 0.998 |
fhs | ftsH | RCA23_c19700 | RCA23_c19720 | Formate--tetrahydrofolate ligase Fhs. | Cell division protease FtsH. | 0.471 |
folD | AII87502.1 | RCA23_c19690 | RCA23_c19710 | Bidunctional enzyme FolD; Includes methylenetetrahydrofolate dehydrogenase, methylenetetrahydrofolate cyclohydrolase. | Hypothetical protein. | 0.455 |
folD | fhs | RCA23_c19690 | RCA23_c19700 | Bidunctional enzyme FolD; Includes methylenetetrahydrofolate dehydrogenase, methylenetetrahydrofolate cyclohydrolase. | Formate--tetrahydrofolate ligase Fhs. | 0.998 |
folD | ftsH | RCA23_c19690 | RCA23_c19720 | Bidunctional enzyme FolD; Includes methylenetetrahydrofolate dehydrogenase, methylenetetrahydrofolate cyclohydrolase. | Cell division protease FtsH. | 0.427 |
ftsH | AII87502.1 | RCA23_c19720 | RCA23_c19710 | Cell division protease FtsH. | Hypothetical protein. | 0.695 |
ftsH | AII87505.1 | RCA23_c19720 | RCA23_c19740 | Cell division protease FtsH. | Hypothetical protein. | 0.703 |
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