STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII87505.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
tolB
Tol-Pal system beta propeller repeat protein TolB.
 
  
 0.957
pal
Peptidoglycan-associated lipoprotein Pal.
  
  
 0.879
tilS
tRNA(Ile)-lysidine synthase TilS.
 
    0.854
AII87508.1
Hypothetical protein, TolA-like protein.
 
   
 0.820
tolR
Biopolymer transport protein TolR.
  
  
 0.750
tolQ
Biopolymer transport protein TolQ.
  
  
 0.744
ftsH
Cell division protease FtsH.
  
  
 0.703
AII87502.1
Hypothetical protein.
 
     0.603
AII87511.1
acyl-CoA thioester hydrolase.
 
   
 0.588
AII86114.1
Hypothetical protein.
  
     0.544
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.