STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctP9TRAP dicarboxylate transporter, subunit DctP. (342 aa)    
Predicted Functional Partners:
dctQ9
TRAP dicarboxylate transporter, subunit DctQ.
 
 
 0.992
dctM9
TRAP dicarboxylate transporter, subunit DctM.
 
 
 0.991
dctQ11
TRAP dicarboxylate transporter, subunit DctQ.
 
 
 0.835
dctM11
TRAP dicarboxylate transporter, subunit DctM.
 
 
 0.815
dctM3
TRAP dicarboxylate transporter, subunit DctM.
 
 
 0.695
dctM6
TRAP dicarboxylate transporter, subunit DctM.
 
 
 0.694
dctM4
TRAP dicarboxylate transporter, subunit DctM.
 
     0.500
dctM2
TRAP dicarboxylate transporter, subunit DctM.
 
 
 0.480
dctM12
TRAP dicarboxylate transporter, subunit DctM.
 
 
 0.453
dctM5
TRAP dicarboxylate transporter, subunit DctM.
 
 
 0.440
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.