STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaJBeta-ketoadipyl CoA thiolase PaaJ. (400 aa)    
Predicted Functional Partners:
AII87434.1
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.
 0.999
fadJ2
Fatty acid oxidation complex alpha subunit FadJ.
 0.999
fadN1
3-hydroxyacyl-CoA dehydrogenase FadN.
 
 0.998
fadJ1
Fatty acid oxidation complex alpha subunit FadJ; Includes enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase.
 
 0.998
AII86009.1
Putative acyl-CoA dehydrogenase YngJ.
  
 0.941
AII86975.1
butyryl-CoA dehydrogenase.
  
 0.941
AII88075.1
Hypothetical protein.
  
 0.941
AII88083.1
acyl-CoA dehydrogenase.
  
 0.941
AII88329.1
Similar to mitochondrial precursor propionyl-CoA carboxylase beta chain.
  
 0.929
mvaB
hydroxymethylglutaryl-CoA lyase MvaB.
  
 
 0.922
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (14%) [HD]