Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AII87090.1 | gcvP | RCA23_c15530 | RCA23_c20300 | Dimethylglycine dehydrogenase. | Glycine dehydrogenase GcvP. | 0.964 |
AII87090.1 | glyA | RCA23_c15530 | RCA23_c02000 | Dimethylglycine dehydrogenase. | Serine hydroxymethyltransferase GlyA. | 0.550 |
AII87090.1 | soxA3 | RCA23_c15530 | RCA23_c18500 | Dimethylglycine dehydrogenase. | Sarcosine oxidase alpha subunit SoxA. | 0.911 |
AII87090.1 | soxA5 | RCA23_c15530 | RCA23_c21680 | Dimethylglycine dehydrogenase. | Sarcosine oxidase alpha subunit SoxA. | 0.919 |
AII87090.1 | soxB3 | RCA23_c15530 | RCA23_c18520 | Dimethylglycine dehydrogenase. | Sarcosine oxidase beta subunit SoxB. | 0.708 |
AII87090.1 | soxD3 | RCA23_c15530 | RCA23_c18510 | Dimethylglycine dehydrogenase. | Sarcosine oxidase subunit SoxD. | 0.898 |
AII87090.1 | soxD5 | RCA23_c15530 | RCA23_c21690 | Dimethylglycine dehydrogenase. | Sarcosine oxidase subunit SoxD. | 0.943 |
AII87090.1 | soxG3 | RCA23_c15530 | RCA23_c18490 | Dimethylglycine dehydrogenase. | Sarcosine oxidase subunit SoxG. | 0.867 |
AII87090.1 | soxG5 | RCA23_c15530 | RCA23_c21670 | Dimethylglycine dehydrogenase. | Sarcosine oxidase subunit SoxG. | 0.945 |
gcvP | AII87090.1 | RCA23_c20300 | RCA23_c15530 | Glycine dehydrogenase GcvP. | Dimethylglycine dehydrogenase. | 0.964 |
gcvP | glyA | RCA23_c20300 | RCA23_c02000 | Glycine dehydrogenase GcvP. | Serine hydroxymethyltransferase GlyA. | 0.997 |
gcvP | sgaA1 | RCA23_c20300 | RCA23_c09760 | Glycine dehydrogenase GcvP. | Serine--glyoxylate aminotransferase SgaA. | 0.934 |
gcvP | soxA3 | RCA23_c20300 | RCA23_c18500 | Glycine dehydrogenase GcvP. | Sarcosine oxidase alpha subunit SoxA. | 0.996 |
gcvP | soxA5 | RCA23_c20300 | RCA23_c21680 | Glycine dehydrogenase GcvP. | Sarcosine oxidase alpha subunit SoxA. | 0.996 |
gcvP | soxB3 | RCA23_c20300 | RCA23_c18520 | Glycine dehydrogenase GcvP. | Sarcosine oxidase beta subunit SoxB. | 0.909 |
gcvP | soxD3 | RCA23_c20300 | RCA23_c18510 | Glycine dehydrogenase GcvP. | Sarcosine oxidase subunit SoxD. | 0.901 |
gcvP | soxD5 | RCA23_c20300 | RCA23_c21690 | Glycine dehydrogenase GcvP. | Sarcosine oxidase subunit SoxD. | 0.901 |
gcvP | soxG3 | RCA23_c20300 | RCA23_c18490 | Glycine dehydrogenase GcvP. | Sarcosine oxidase subunit SoxG. | 0.904 |
gcvP | soxG5 | RCA23_c20300 | RCA23_c21670 | Glycine dehydrogenase GcvP. | Sarcosine oxidase subunit SoxG. | 0.904 |
glyA | AII87090.1 | RCA23_c02000 | RCA23_c15530 | Serine hydroxymethyltransferase GlyA. | Dimethylglycine dehydrogenase. | 0.550 |
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