STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII87836.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
AII87838.1
Hypothetical protein.
 
     0.959
AII87839.1
Hypothetical protein.
 
     0.959
AII87835.1
Hypothetical protein.
 
     0.909
AII87834.1
Hypothetical protein, 4Fe-4S ferredoxin-like protein.
 
     0.821
AII87837.1
Hypothetical protein, Mrp/NBP35 family protein.
       0.814
fdhI
Formate dehydrogenase, gamma subunit FdhI.
 
     0.811
AII87832.1
Hypothetical protein.
 
     0.788
AII87833.1
Putative molybdopterin-guanine dinucleotide biosynthesis protein A.
 
     0.782
AII87830.1
Putative twin-arginine translocation pathway signal sequence domain protein.
 
     0.775
AII87831.1
Hypothetical protein, cytoplasmic chaperon TorD.
 
     0.772
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.