STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII87867.1Amidohydrolase. (298 aa)    
Predicted Functional Partners:
AII87860.1
Putative aldo/keto reductase.
 
    0.686
AII87844.1
Putative pyridoxal 4-dehydrogenase.
 
    0.662
fabG4
3-ketoacyl-(acyl-carrier-protein) reductase FabG.
  
    0.655
pld
Pyridoxal 4-dehydrogenase Pld.
 
    0.601
AII87866.1
Dihydrodipicolinate synthase DapA.
  
  
 0.546
rhaM
L-rhamnose mutarotase RhaM.
 
  
 0.528
rhmD
L-rhamnonate dehydratase RhmD.
     
 0.435
AII87850.1
Putative rhamnose mutarotase RhaM.
 
  
 0.423
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.