STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zurZinc uptake regulator. (171 aa)    
Predicted Functional Partners:
znuC
Zinc import ATP-binding protein ZnuC.
  
 0.985
znuB
High-affinity zinc uptake system membrane protein ZnuB.
 
  
 0.939
znuA
High-affinity zinc uptake system protein ZnuA.
 
  
 0.920
AII87950.1
Putative transcriptional repressor.
  
  
 0.616
gltB
Glutamate synthase [NADPH] large chain GltB.
     
 0.530
rpoA
DNA-directed RNA polymerase alpha subunit RpoA.
   
   0.528
hpd
4-hydroxyphenylpyruvate dioxygenase Hpd.
     
 0.525
AII88045.1
Hypothetical protein.
  
    0.478
rpoC
DNA-directed RNA polymerase beta subunit RpoC.
  
 
 0.431
AII87545.1
Putative ferric uptake regulator family protein.
      
 0.430
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.