Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AII87338.1 | AII87342.1 | RCA23_c18060 | RCA23_c18100 | Aminodeoxychorismate lyase. | Malonyl CoA-acyl carrier protein transacylase. | 0.454 |
AII87338.1 | AII88016.1 | RCA23_c18060 | RCA23_c24950 | Aminodeoxychorismate lyase. | TatD family deoxyribonuclease. | 0.664 |
AII87342.1 | AII87338.1 | RCA23_c18100 | RCA23_c18060 | Malonyl CoA-acyl carrier protein transacylase. | Aminodeoxychorismate lyase. | 0.454 |
AII87342.1 | AII88016.1 | RCA23_c18100 | RCA23_c24950 | Malonyl CoA-acyl carrier protein transacylase. | TatD family deoxyribonuclease. | 0.691 |
AII87342.1 | ksgA | RCA23_c18100 | RCA23_c17830 | Malonyl CoA-acyl carrier protein transacylase. | Dimethyladenosine transferase KsgA. | 0.523 |
AII87342.1 | tmk | RCA23_c18100 | RCA23_c24930 | Malonyl CoA-acyl carrier protein transacylase. | Thymidylate kinase Tmk. | 0.495 |
AII88015.1 | AII88016.1 | RCA23_c24940 | RCA23_c24950 | Hypothetical protein, DNA polymerase III delta subunit. | TatD family deoxyribonuclease. | 0.871 |
AII88015.1 | AII88017.1 | RCA23_c24940 | RCA23_c24960 | Hypothetical protein, DNA polymerase III delta subunit. | Hypothetical protein, metallo-beta-lactamase. | 0.855 |
AII88015.1 | AII88018.1 | RCA23_c24940 | RCA23_c24970 | Hypothetical protein, DNA polymerase III delta subunit. | Membrane transport protein. | 0.829 |
AII88015.1 | dacC | RCA23_c24940 | RCA23_c24920 | Hypothetical protein, DNA polymerase III delta subunit. | D-alanyl-D-alanine carboxypeptidase DacC. | 0.829 |
AII88015.1 | dnaX | RCA23_c24940 | RCA23_c06230 | Hypothetical protein, DNA polymerase III delta subunit. | DNA polymerase III subunit tau. | 0.996 |
AII88015.1 | tmk | RCA23_c24940 | RCA23_c24930 | Hypothetical protein, DNA polymerase III delta subunit. | Thymidylate kinase Tmk. | 0.966 |
AII88016.1 | AII87338.1 | RCA23_c24950 | RCA23_c18060 | TatD family deoxyribonuclease. | Aminodeoxychorismate lyase. | 0.664 |
AII88016.1 | AII87342.1 | RCA23_c24950 | RCA23_c18100 | TatD family deoxyribonuclease. | Malonyl CoA-acyl carrier protein transacylase. | 0.691 |
AII88016.1 | AII88015.1 | RCA23_c24950 | RCA23_c24940 | TatD family deoxyribonuclease. | Hypothetical protein, DNA polymerase III delta subunit. | 0.871 |
AII88016.1 | AII88017.1 | RCA23_c24950 | RCA23_c24960 | TatD family deoxyribonuclease. | Hypothetical protein, metallo-beta-lactamase. | 0.833 |
AII88016.1 | AII88018.1 | RCA23_c24950 | RCA23_c24970 | TatD family deoxyribonuclease. | Membrane transport protein. | 0.829 |
AII88016.1 | dacC | RCA23_c24950 | RCA23_c24920 | TatD family deoxyribonuclease. | D-alanyl-D-alanine carboxypeptidase DacC. | 0.835 |
AII88016.1 | dnaX | RCA23_c24950 | RCA23_c06230 | TatD family deoxyribonuclease. | DNA polymerase III subunit tau. | 0.571 |
AII88016.1 | ksgA | RCA23_c24950 | RCA23_c17830 | TatD family deoxyribonuclease. | Dimethyladenosine transferase KsgA. | 0.799 |
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