STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII88051.1Ammonium transporter. (445 aa)    
Predicted Functional Partners:
glnB2
Nitrogen regulatory protein P-II 2.
 
 0.998
glnB1
Nitrogen regulatory protein P-II 1.
 
 0.993
gltB
Glutamate synthase [NADPH] large chain GltB.
 
  
 0.920
AII85728.1
Putative signaling protein; With diguanylate cyclase activity.
 
      0.899
AII87901.1
Putative diguanylate phosphodiesterase.
      0.844
AII86146.1
Signaling protein; With putative diguanylate phosphodiesterase function.
     0.797
ntrB
Histidine kinase, nitrogen regulation protein NtrB.
  
 
 0.598
AII86251.1
Signal transduction histidine kinase.
 
 
 0.546
nadE
Glutamine-dependent NAD(+) synthase NadE.
     
 0.530
bchL
Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein BchL.
  
  
 0.511
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.