Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AII88172.1 | AII88173.1 | RCA23_c26560 | RCA23_c26570 | Type I secretion outer membrane protein, TolC family. | Type I secretion system ATP-binding component. | 0.857 |
AII88172.1 | AII88174.1 | RCA23_c26560 | RCA23_c26580 | Type I secretion outer membrane protein, TolC family. | Type I RTX secretion system membrane fusion protein, HlyD family. | 0.901 |
AII88172.1 | AII88175.1 | RCA23_c26560 | RCA23_c26590 | Type I secretion outer membrane protein, TolC family. | Hypothetical protein. | 0.601 |
AII88173.1 | AII88172.1 | RCA23_c26570 | RCA23_c26560 | Type I secretion system ATP-binding component. | Type I secretion outer membrane protein, TolC family. | 0.857 |
AII88173.1 | AII88174.1 | RCA23_c26570 | RCA23_c26580 | Type I secretion system ATP-binding component. | Type I RTX secretion system membrane fusion protein, HlyD family. | 0.975 |
AII88173.1 | AII88175.1 | RCA23_c26570 | RCA23_c26590 | Type I secretion system ATP-binding component. | Hypothetical protein. | 0.601 |
AII88174.1 | AII88172.1 | RCA23_c26580 | RCA23_c26560 | Type I RTX secretion system membrane fusion protein, HlyD family. | Type I secretion outer membrane protein, TolC family. | 0.901 |
AII88174.1 | AII88173.1 | RCA23_c26580 | RCA23_c26570 | Type I RTX secretion system membrane fusion protein, HlyD family. | Type I secretion system ATP-binding component. | 0.975 |
AII88174.1 | AII88175.1 | RCA23_c26580 | RCA23_c26590 | Type I RTX secretion system membrane fusion protein, HlyD family. | Hypothetical protein. | 0.634 |
AII88175.1 | AII88172.1 | RCA23_c26590 | RCA23_c26560 | Hypothetical protein. | Type I secretion outer membrane protein, TolC family. | 0.601 |
AII88175.1 | AII88173.1 | RCA23_c26590 | RCA23_c26570 | Hypothetical protein. | Type I secretion system ATP-binding component. | 0.601 |
AII88175.1 | AII88174.1 | RCA23_c26590 | RCA23_c26580 | Hypothetical protein. | Type I RTX secretion system membrane fusion protein, HlyD family. | 0.634 |
AII88175.1 | AII88176.1 | RCA23_c26590 | RCA23_c26600 | Hypothetical protein. | Hypothetical protein. | 0.456 |
AII88175.1 | AII88177.1 | RCA23_c26590 | RCA23_c26610 | Hypothetical protein. | Hypothetical protein. | 0.450 |
AII88175.1 | AII88178.1 | RCA23_c26590 | RCA23_c26620 | Hypothetical protein. | Hypothetical protein. | 0.423 |
AII88176.1 | AII88175.1 | RCA23_c26600 | RCA23_c26590 | Hypothetical protein. | Hypothetical protein. | 0.456 |
AII88176.1 | AII88177.1 | RCA23_c26600 | RCA23_c26610 | Hypothetical protein. | Hypothetical protein. | 0.762 |
AII88176.1 | AII88178.1 | RCA23_c26600 | RCA23_c26620 | Hypothetical protein. | Hypothetical protein. | 0.708 |
AII88177.1 | AII88175.1 | RCA23_c26610 | RCA23_c26590 | Hypothetical protein. | Hypothetical protein. | 0.450 |
AII88177.1 | AII88176.1 | RCA23_c26610 | RCA23_c26600 | Hypothetical protein. | Hypothetical protein. | 0.762 |
page 1 of 2