Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AII86046.1 | puuB2 | RCA23_c04860 | RCA23_c27840 | Aldehyde dehydrogenase. | Gamma-glutamylputrescine oxidoreductase PuuB. | 0.919 |
AII86046.1 | puuC | RCA23_c04860 | RCA23_c26350 | Aldehyde dehydrogenase. | Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC. | 0.909 |
AII88290.1 | puuA2 | RCA23_c27820 | RCA23_c27810 | Hypothetical protein, glutamine amidotransferase class I. | Gamma-glutamylputrescine synthase PuuA. | 0.731 |
AII88290.1 | puuA3 | RCA23_c27820 | RCA23_c27830 | Hypothetical protein, glutamine amidotransferase class I. | Gamma-glutamylputrescine synthase PuuA. | 0.835 |
AII88290.1 | puuB2 | RCA23_c27820 | RCA23_c27840 | Hypothetical protein, glutamine amidotransferase class I. | Gamma-glutamylputrescine oxidoreductase PuuB. | 0.850 |
puuA2 | AII88290.1 | RCA23_c27810 | RCA23_c27820 | Gamma-glutamylputrescine synthase PuuA. | Hypothetical protein, glutamine amidotransferase class I. | 0.731 |
puuA2 | puuA3 | RCA23_c27810 | RCA23_c27830 | Gamma-glutamylputrescine synthase PuuA. | Gamma-glutamylputrescine synthase PuuA. | 0.933 |
puuA2 | puuB2 | RCA23_c27810 | RCA23_c27840 | Gamma-glutamylputrescine synthase PuuA. | Gamma-glutamylputrescine oxidoreductase PuuB. | 0.887 |
puuA2 | puuD | RCA23_c27810 | RCA23_c10660 | Gamma-glutamylputrescine synthase PuuA. | Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD. | 0.517 |
puuA3 | AII88290.1 | RCA23_c27830 | RCA23_c27820 | Gamma-glutamylputrescine synthase PuuA. | Hypothetical protein, glutamine amidotransferase class I. | 0.835 |
puuA3 | puuA2 | RCA23_c27830 | RCA23_c27810 | Gamma-glutamylputrescine synthase PuuA. | Gamma-glutamylputrescine synthase PuuA. | 0.933 |
puuA3 | puuB2 | RCA23_c27830 | RCA23_c27840 | Gamma-glutamylputrescine synthase PuuA. | Gamma-glutamylputrescine oxidoreductase PuuB. | 0.950 |
puuA3 | puuD | RCA23_c27830 | RCA23_c10660 | Gamma-glutamylputrescine synthase PuuA. | Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD. | 0.637 |
puuB2 | AII86046.1 | RCA23_c27840 | RCA23_c04860 | Gamma-glutamylputrescine oxidoreductase PuuB. | Aldehyde dehydrogenase. | 0.919 |
puuB2 | AII88290.1 | RCA23_c27840 | RCA23_c27820 | Gamma-glutamylputrescine oxidoreductase PuuB. | Hypothetical protein, glutamine amidotransferase class I. | 0.850 |
puuB2 | puuA2 | RCA23_c27840 | RCA23_c27810 | Gamma-glutamylputrescine oxidoreductase PuuB. | Gamma-glutamylputrescine synthase PuuA. | 0.887 |
puuB2 | puuA3 | RCA23_c27840 | RCA23_c27830 | Gamma-glutamylputrescine oxidoreductase PuuB. | Gamma-glutamylputrescine synthase PuuA. | 0.950 |
puuB2 | puuC | RCA23_c27840 | RCA23_c26350 | Gamma-glutamylputrescine oxidoreductase PuuB. | Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC. | 0.918 |
puuB2 | puuD | RCA23_c27840 | RCA23_c10660 | Gamma-glutamylputrescine oxidoreductase PuuB. | Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD. | 0.712 |
puuB2 | soxA1 | RCA23_c27840 | RCA23_c06830 | Gamma-glutamylputrescine oxidoreductase PuuB. | Sarcosine oxidase alpha subunit SoxA. | 0.702 |
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