STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII88304.1Thymidylate synthase. (303 aa)    
Predicted Functional Partners:
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut.
    
 0.939
glyA
Serine hydroxymethyltransferase GlyA.
   
 0.933
fmt
methionyl-tRNA formyltransferase Fmt.
    
 0.925
folD
Bidunctional enzyme FolD; Includes methylenetetrahydrofolate dehydrogenase, methylenetetrahydrofolate cyclohydrolase.
    
 0.924
tdk
Thymidine kinase Tdk.
    
 0.920
purN
Phosphoribosylglycinamide formyltransferase PurN.
  
 
 0.918
tmk
Thymidylate kinase Tmk.
    
 0.918
purH
Bifunctional purine biosynthesis protein PurH; Includes phosphoribosylaminoimidazolecarboxamide formyltransferase.
     
 0.913
metF
5,10-methylenetetrahydrofolate reductase MetF.
     
 0.905
AII87293.1
Hypothetical protein.
     
 0.905
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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