STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AII88413.1enoyl-CoA hydratase. (264 aa)    
Predicted Functional Partners:
fadJ1
Fatty acid oxidation complex alpha subunit FadJ; Includes enoyl-CoA hydratase/3-hydroxybutyryl-CoA epimerase.
 
 0.991
AII87434.1
3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein.
0.991
fadJ2
Fatty acid oxidation complex alpha subunit FadJ.
0.983
AII87735.1
Putative 3-hydroxyacyl-CoA dehydrogenase.
 
 0.943
fadN1
3-hydroxyacyl-CoA dehydrogenase FadN.
 
0.930
AII87615.1
Putative MaoC-like dehydratase.
  
 0.924
AII88605.1
enoyl-CoA hydratase/isomerase.
  
  
 
0.914
AII88412.1
L-threonine 3-dehydrogenase.
   
 0.820
AII86251.1
Signal transduction histidine kinase.
   
 
 0.790
paaJ
Beta-ketoadipyl CoA thiolase PaaJ.
  
 0.777
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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