Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AII88476.1 | bchG | RCA23_c29760 | RCA23_c29750 | Cytochrome c-551. | Bacteriochlorophyll synthase BchG. | 0.572 |
AII88476.1 | bchP | RCA23_c29760 | RCA23_c29730 | Cytochrome c-551. | Geranylgeranyl reductase BchP. | 0.547 |
AII88476.1 | ctaD | RCA23_c29760 | RCA23_c02540 | Cytochrome c-551. | Cytochrome c oxidase subunit 1. | 0.633 |
AII88476.1 | dmsA | RCA23_c29760 | RCA23_c01640 | Cytochrome c-551. | DMSO reductase chain A. | 0.632 |
AII88476.1 | nuoEF | RCA23_c29760 | RCA23_c27540 | Cytochrome c-551. | NADH-quinone oxidoreductase subunits E/F (fused). | 0.631 |
AII88476.1 | petA | RCA23_c29760 | RCA23_c00360 | Cytochrome c-551. | Ubiquinol-cytochrome c reductase iron-sulfur subunit PetA. | 0.903 |
AII88476.1 | petB | RCA23_c29760 | RCA23_c00350 | Cytochrome c-551. | Cytochrome b. | 0.748 |
AII88476.1 | petC | RCA23_c29760 | RCA23_c00340 | Cytochrome c-551. | Cytochrome c1. | 0.933 |
AII88476.1 | puhA | RCA23_c29760 | RCA23_c29860 | Cytochrome c-551. | Photosynthetic reaction center H subunit. | 0.794 |
AII88476.1 | sdhC | RCA23_c29760 | RCA23_c14040 | Cytochrome c-551. | Succinate dehydrogenase cytochrome b556 subunit SdhC. | 0.569 |
bchG | AII88476.1 | RCA23_c29750 | RCA23_c29760 | Bacteriochlorophyll synthase BchG. | Cytochrome c-551. | 0.572 |
bchG | bchP | RCA23_c29750 | RCA23_c29730 | Bacteriochlorophyll synthase BchG. | Geranylgeranyl reductase BchP. | 0.999 |
bchG | puhA | RCA23_c29750 | RCA23_c29860 | Bacteriochlorophyll synthase BchG. | Photosynthetic reaction center H subunit. | 0.872 |
bchP | AII88476.1 | RCA23_c29730 | RCA23_c29760 | Geranylgeranyl reductase BchP. | Cytochrome c-551. | 0.547 |
bchP | bchG | RCA23_c29730 | RCA23_c29750 | Geranylgeranyl reductase BchP. | Bacteriochlorophyll synthase BchG. | 0.999 |
bchP | puhA | RCA23_c29730 | RCA23_c29860 | Geranylgeranyl reductase BchP. | Photosynthetic reaction center H subunit. | 0.827 |
ctaD | AII88476.1 | RCA23_c02540 | RCA23_c29760 | Cytochrome c oxidase subunit 1. | Cytochrome c-551. | 0.633 |
ctaD | nuoEF | RCA23_c02540 | RCA23_c27540 | Cytochrome c oxidase subunit 1. | NADH-quinone oxidoreductase subunits E/F (fused). | 0.949 |
ctaD | petA | RCA23_c02540 | RCA23_c00360 | Cytochrome c oxidase subunit 1. | Ubiquinol-cytochrome c reductase iron-sulfur subunit PetA. | 0.985 |
ctaD | petB | RCA23_c02540 | RCA23_c00350 | Cytochrome c oxidase subunit 1. | Cytochrome b. | 0.999 |
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