STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
infBTranslation initiation factor IF-2. (821 aa)    
Predicted Functional Partners:
rpsB
30S ribosomal protein S2.
 
 0.995
rpsC
30S ribosomal protein S3.
  
 0.994
rpoC
DNA-directed RNA polymerase beta subunit RpoC.
 
 0.994
rpsD
30S ribosomal protein S4.
 
 0.992
rpsE
30S ribosomal protein S5.
  
 0.991
rpsG
30S ribosomal protein S7.
  
 0.989
rplD
50S ribosomal protein L4.
 
 0.988
rpsK
30S ribosomal protein S11.
  
 0.986
rpsS
30S ribosomal protein S19.
   
 0.986
rplO
50S ribosomal protein L15.
  
 0.984
Your Current Organism:
Planktomarina temperata
NCBI taxonomy Id: 666509
Other names: Candidatus Planktomarina temperata RCA23, P. temperata RCA23, Planktomarina temperata RCA23, Planktomarina temperata str. RCA23, Planktomarina temperata strain RCA23, Rhodobacteraceae bacterium RCA23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.