STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0010CRISPR-associated RAMP protein, Cmr6 family. (250 aa)    
Predicted Functional Partners:
ASAC_0009
Hypothetical protein.
 
 
 
 0.992
ASAC_0013
CRISPR-associated RAMP protein, Cmr4 family.
 
 
 
 0.991
ASAC_0008
Hypothetical protein.
   
 
 0.938
ASAC_0011
Hypothetical protein.
   
 
 0.926
ASAC_0012
Hypothetical protein.
       0.833
ASAC_0014
Hypothetical protein.
     
 0.655
ASAC_1421
Extracellular solute-binding protein, family 1.
  
     0.655
ASAC_0825
Membrane bound alpha-amylase.
  
     0.649
ASAC_0689
Extracellular solute-binding protein, family 1.
  
     0.641
ASAC_0601
Extracellular solute-binding protein, family 1.
  
     0.617
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.