Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0019Putative major facilitator transporter. (400 aa)    
Predicted Functional Partners:
ASAC_0574
Amino acid permease.
 
 
 0.686
ASAC_0020
ABC transporter related protein.
   
 
 0.685
ASAC_0741
Amino acid permease-associated region.
 
 
 0.674
ASAC_0021
Hypothetical protein.
       0.648
ASAC_0330
Amino acid permease.
 
 
 0.585
ASAC_1331
Amino acid transporter related protein.
 
 
 0.577
ASAC_1418
Probable cationic amino acid permease.
  
     0.568
ASAC_0601
Extracellular solute-binding protein, family 1.
  
     0.518
ASAC_0161
Transporter.
  
     0.511
ASAC_0689
Extracellular solute-binding protein, family 1.
  
     0.508
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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