STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiXProbable aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (194 aa)    
Predicted Functional Partners:
ASAC_1392
3-octaprenyl-4-hydroxybenzoate carboxy-lyase.
 
 0.990
ASAC_1369
UbiD 3-octaprenyl-4-hydroxybenzoate carboxylyase.
 
  
 0.913
ASAC_0030
ATP-dependent 6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
       0.782
ASAC_0029
Fructose-1,6-bisphosphate aldolase.
       0.765
ASAC_0782
Probable (S)-2,3-Di-O-farnesylgeranylglyceryl synthase.
     
 0.666
ASAC_0028
Hypothetical protein.
       0.496
ASAC_0179
Molybdopterin converting factor.
     
 0.450
ASAC_0767
Hypothetical protein.
     
 0.402
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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