Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0045Hypothetical protein. (280 aa)    
Predicted Functional Partners:
ASAC_0044
DUF162 domain containing protein.
 
 
 0.947
ASAC_0120
Putative iron-sulfur protein.
  
     0.697
ASAC_1290
Electron transfer flavoprotein alpha-subunit.
 
  
 0.511
ASAC_1289
Electron transfer flavoprotein beta-subunit.
 
  
 0.478
ASAC_0046
Hypothetical protein.
       0.471
ASAC_1338
D-lactate dehydrogenase.
  
  
 0.454
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.433
ASAC_1031
3-Hydroxyacyl-CoA dehydrogenase.
 
  
 0.433
gap
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH).
  
  
 0.428
ASAC_0264
Electron transfer flavoprotein alpha-subunit.
 
  
 0.407
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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