STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0078Glycosyl transferase, putative. (363 aa)    
Predicted Functional Partners:
ASAC_0560
Polysaccharide deacetylase.
 
  
 0.846
ASAC_0627
Creatininase.
  
  
 0.689
ASAC_1493
Creatinine amidohydrolase.
  
  
 0.689
ASAC_0195
Dolichol-phosphate mannosyltransferase.
 
 
 0.665
ASAC_0077
Probable tRNA pseudouridine synthase D.
  
    0.610
ASAC_0080
Glycosyl transferase, family 2.
 
 
 0.600
ASAC_0367
UDP-glucose 4-epimerase.
 
 
 0.482
ASAC_0065
Glycosyl transferase, family 2.
  
     0.468
ASAC_0064
NAD-dependent epimerase/dehydratase.
 
 
 0.461
ASAC_0076
Hypothetical protein.
       0.456
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.