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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0113Predicted Fe-S oxidoreductase. (390 aa)    
Predicted Functional Partners:
ASAC_0111
Predicted Fe-S oxidoreductase.
 
  
 
0.981
ASAC_0112
Hypothetical protein.
 
  
 0.947
ASAC_0114
Siroheme synthase.
       0.799
ASAC_0746
Radical SAM domain protein.
 
     0.673
ASAC_0109
Hypothetical protein.
  
  
 0.661
srp19
Signal recognition particle protein Srp19; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.
       0.588
ASAC_0647
Nitric oxide reductase, cytochrome b subunit.
 
  
 0.584
ASAC_0728
Coproporphyrinogen III oxidase.
 
  
 0.466
ASAC_0179
Molybdopterin converting factor.
  
  
 0.462
ASAC_0531
Beta-lactamase domain-containing protein.
 
  
 0.425
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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