Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ASAC_0077 | ASAC_0213 | ASAC_0077 | ASAC_0213 | Probable tRNA pseudouridine synthase D. | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.779 |
| ASAC_0077 | pus10 | ASAC_0077 | ASAC_0174 | Probable tRNA pseudouridine synthase D. | Predicted pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. | 0.595 |
| ASAC_0170 | ASAC_0173 | ASAC_0170 | ASAC_0173 | Predicted Zn-ribbon RNA-binding protein. | Metallophosphoesterase. | 0.443 |
| ASAC_0170 | nusA | ASAC_0170 | ASAC_1179 | Predicted Zn-ribbon RNA-binding protein. | Transcription elongation factor NusA-like protein; Participates in transcription termination. Belongs to the NusA family. | 0.554 |
| ASAC_0170 | pus10 | ASAC_0170 | ASAC_0174 | Predicted Zn-ribbon RNA-binding protein. | Predicted pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. | 0.610 |
| ASAC_0173 | ASAC_0170 | ASAC_0173 | ASAC_0170 | Metallophosphoesterase. | Predicted Zn-ribbon RNA-binding protein. | 0.443 |
| ASAC_0173 | ASAC_0175 | ASAC_0173 | ASAC_0175 | Metallophosphoesterase. | Citrate transporter. | 0.609 |
| ASAC_0173 | pus10 | ASAC_0173 | ASAC_0174 | Metallophosphoesterase. | Predicted pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. | 0.529 |
| ASAC_0175 | ASAC_0173 | ASAC_0175 | ASAC_0173 | Citrate transporter. | Metallophosphoesterase. | 0.609 |
| ASAC_0175 | pus10 | ASAC_0175 | ASAC_0174 | Citrate transporter. | Predicted pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. | 0.783 |
| ASAC_0211 | ASAC_0213 | ASAC_0211 | ASAC_0213 | Putative HTH-type transcriptional regulatory. | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | 0.854 |
| ASAC_0211 | pus10 | ASAC_0211 | ASAC_0174 | Putative HTH-type transcriptional regulatory. | Predicted pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. | 0.644 |
| ASAC_0211 | tiaS | ASAC_0211 | ASAC_1057 | Putative HTH-type transcriptional regulatory. | Hypothetical protein; ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA. | 0.524 |
| ASAC_0213 | ASAC_0077 | ASAC_0213 | ASAC_0077 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Probable tRNA pseudouridine synthase D. | 0.779 |
| ASAC_0213 | ASAC_0211 | ASAC_0213 | ASAC_0211 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Putative HTH-type transcriptional regulatory. | 0.854 |
| ASAC_0213 | pus10 | ASAC_0213 | ASAC_0174 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Predicted pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. | 0.614 |
| ASAC_0213 | thiI | ASAC_0213 | ASAC_0618 | N2,N2-dimethylguanosine tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family. | Probable thiamine biosynthesis protein thiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.539 |
| ASAC_0452 | nusA | ASAC_0452 | ASAC_1179 | DUF655 domain containing protein. | Transcription elongation factor NusA-like protein; Participates in transcription termination. Belongs to the NusA family. | 0.539 |
| ASAC_0452 | pus10 | ASAC_0452 | ASAC_0174 | DUF655 domain containing protein. | Predicted pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil-54 and uracil-55 in the psi GC loop of transfer RNAs. | 0.535 |
| nusA | ASAC_0170 | ASAC_1179 | ASAC_0170 | Transcription elongation factor NusA-like protein; Participates in transcription termination. Belongs to the NusA family. | Predicted Zn-ribbon RNA-binding protein. | 0.554 |
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