Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ASAC_0181Putative ATP-dependent helicase. (938 aa)    
Predicted Functional Partners:
ASAC_0180
Hypothetical protein.
       0.790
ASAC_0182
Hypothetical protein.
       0.777
ASAC_0046
Hypothetical protein.
      
 0.618
ASAC_0179
Molybdopterin converting factor.
  
    0.579
ASAC_1160
Predicted ATPase.
     
 0.537
nfi
Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
      
 0.515
ASAC_0196
Phosphoesterase, putative.
 
    0.484
ASAC_0551
ATP-dependent helicase.
 
   
 0.456
rpl14e
50S ribosomal protein L14e; Belongs to the eukaryotic ribosomal protein eL14 family.
       0.451
ASAC_1245
Hypothetical protein.
       0.438
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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