STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0217Type II secretion system protein E. (470 aa)    
Predicted Functional Partners:
ASAC_0216
Hypothetical protein.
  
  
 0.910
ASAC_0218
Hypothetical protein.
       0.799
ASAC_1466
Archaeal flagellar like-protein J.
  
  
 0.760
ASAC_1464
Archaeal flagellar like-protein H.
 
  
 0.735
ASAC_1462
Hypothetical protein.
  
  
 0.721
ASAC_0301
Hypothetical protein.
  
  
 0.624
ASAC_0300
Hypothetical protein.
  
  
 0.602
ASAC_0219
Probable deoxyhypusine synthase.
 
     0.590
ASAC_1463
Hypothetical protein.
  
  
 0.569
top6A
Type II DNA topoisomerase VI subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family.
 
     0.522
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.