STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0240Predicted dehydrogenase. (471 aa)    
Predicted Functional Partners:
ASAC_0782
Probable (S)-2,3-Di-O-farnesylgeranylglyceryl synthase.
 
 
 0.847
ASAC_0266
Ferredoxin like protein.
 
 
 0.711
carS
Hypothetical protein; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
  
  
 0.656
ASAC_1319
Dehydrogenase.
 
     0.619
ASAC_0265
Electron transfer flavoprotein beta-subunit.
  
 
 0.612
ASAC_1289
Electron transfer flavoprotein beta-subunit.
  
 
 0.612
ASAC_0239
Small heat shock protein; Belongs to the small heat shock protein (HSP20) family.
       0.602
ASAC_0264
Electron transfer flavoprotein alpha-subunit.
  
 
 0.538
ASAC_1290
Electron transfer flavoprotein alpha-subunit.
  
 
 0.538
ASAC_0387
Geranylgeranyl pyrophosphate synthetase, putative; Belongs to the FPP/GGPP synthase family.
 
 
 0.497
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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