STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0242Predicted 1,4-dihydroxy-2-naphthoate octaprenyltransferase. (277 aa)    
Predicted Functional Partners:
ASAC_0632
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
  
  
 
0.922
ASAC_1391
1,4-dihydroxy-2-naphthoate octaprenyltransferase precursor.
  
  
 
0.920
ASAC_1429
Methyltransferase type 11.
    
 0.919
ASAC_1038
3-hydroxy-3-methylglutaryl-coenzyme A reductase; Belongs to the HMG-CoA reductase family.
   
 
 0.613
ASAC_0850
Prenyltransferase.
  
  
 
0.551
cysS
Cysteinyl-tRNA synthetase.
  
    0.539
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
    
 0.515
ASAC_0387
Geranylgeranyl pyrophosphate synthetase, putative; Belongs to the FPP/GGPP synthase family.
 
   
 0.433
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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