Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ASAC_0273Hypothetical protein. (261 aa)    
Predicted Functional Partners:
ASAC_0272
DUF137 domain containing protein.
    
 0.994
ASAC_1244
Putative 2-dehydropantoate 2-reductase.
    
 0.956
htpX
Probable protease htpX-like protein; Belongs to the peptidase M48B family.
  
    0.851
alaS
Alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
    0.706
metE
Probable methylcobalamin:homocysteine methyltransferase; Catalyzes the transfer of a methyl group to L-homocysteine resulting in methionine formation. The physiological methyl donor is unknown.
  
    0.686
ASAC_0275
Coenzyme A biosynthesis bifunctional protein CoaBC.
     
 0.647
ASAC_0512
Malate dehydrogenase.
  
    0.627
ASAC_0978
Malate dehydrogenase.
  
    0.627
ASAC_0972
Orotidine 5'-phosphate decarboxylase.
      
 0.612
ASAC_0082
MoxR-like ATPase.
   
    0.610
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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