STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0288Putative L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (308 aa)    
Predicted Functional Partners:
ASAC_0537
Fumarate hydratase.
  
 0.987
ASAC_0817
Isocitrate dehydrogenase (NADP+-dependent).
  
 
 0.987
ASAC_0871
Citrate synthase.
  
 0.987
ASAC_1277
Fumarase (fumarate hydratase) class I, N-terminal domain protein.
  
 
 0.985
ASAC_1278
Fumarase (fumarate hydratase) class I, C-terminal domain protein.
  
 
 0.985
ASAC_0512
Malate dehydrogenase.
  
 0.949
ASAC_0978
Malate dehydrogenase.
  
 0.949
ASAC_0616
Aspartate aminotransferase.
  
 0.944
ASAC_0828
Putative aspartate/alanine aminotransferase.
  
 0.944
gap
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH).
  
 
 0.935
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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