Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0300Hypothetical protein. (281 aa)    
Predicted Functional Partners:
ASAC_0299
Type II secretion system protein E.
  
  
 0.874
ASAC_0301
Hypothetical protein.
       0.838
ASAC_1465
Archaeal flagellar like-protein I.
  
  
 0.538
ASAC_0217
Type II secretion system protein E.
  
  
 0.528
ASAC_0302
Hypothetical protein.
       0.528
ASAC_0297
Hypothetical protein.
       0.464
ASAC_0298
Hypothetical protein.
       0.464
ASAC_0303
Hypothetical protein.
       0.444
ASAC_1248
Putative GTP-binding protein; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.410
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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