STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASAC_0369Sulfate ABC transporter, ATP binding protein. (336 aa)    
Predicted Functional Partners:
ASAC_0370
Sulfate ABC transporter, permease protein.
 0.998
ASAC_0371
Sulfate ABC transporter, sulfate-binding protein.
 
  
  0.974
ASAC_0536
ABC-type multidrug transport system, ATPase component.
    
0.915
ASAC_1373
ABC transporter, ATP binding protein.
    
0.913
ASAC_1382
Sugar ABC transporter, ATP-binding protein.
 
    
0.899
ASAC_0807
Dipeptide/oligopeptide ABC transporter, ATPase component.
 
     
0.894
ASAC_0372
Hypothetical protein.
       0.595
ASAC_0499
Putative ABC transporter, ATP binding protein.
   
0.551
ASAC_0800
Branched-chain amino acid ABC transporter, permease protein.
 
      0.540
rpl2
50S ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
 
     0.523
Your Current Organism:
Acidilobus saccharovorans
NCBI taxonomy Id: 666510
Other names: A. saccharovorans 345-15, Acidilobus saccharovorans 345-15, Acidilobus saccharovorans str. 345-15, Acidilobus saccharovorans strain 345-15, Acidilobus sp. 345-15
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.